PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cla010041
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Citrullus
Family ERF
Protein Properties Length: 360aa    MW: 40084.4 Da    PI: 6.6489
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cla010041genomeICuGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.76.8e-1959108255
        AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                +y+GVr+++ +gr++AeIrdp++   + r +lg+f+taeeAa+a++ a+++++g
  Cla010041  59 RYRGVRRRP-WGRYAAEIRDPNS---KERRWLGTFDTAEEAARAYDCAARAMRG 108
                59*******.**********832...4999**********************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103222.74859116IPR001471AP2/ERF domain
CDDcd000181.01E-3159115No hitNo description
PfamPF008474.7E-1359108IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.4E-3059115IPR001471AP2/ERF domain
SMARTSM003809.6E-3559122IPR001471AP2/ERF domain
SuperFamilySSF541711.18E-2159116IPR016177DNA-binding domain
PRINTSPR003674.1E-106071IPR001471AP2/ERF domain
PRINTSPR003674.1E-108298IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009733Biological Processresponse to auxin
GO:0009880Biological Processembryonic pattern specification
GO:0048825Biological Processcotyledon development
GO:0051726Biological Processregulation of cell cycle
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 360 aa     Download sequence    Send to blast
MEEALRRLNG LPITASHFDD AVSTPNNHRK KTAVAAAISS TANADRRITR EGSSSGAMRY  60
RGVRRRPWGR YAAEIRDPNS KERRWLGTFD TAEEAARAYD CAARAMRGLK ARTNFVYPPT  120
PSPPHSLSDQ LLSPLNFTKQ SQIARHLATS SNWSSFTNAH TFDYPEPASQ KIPPSSFLNM  180
LLPHHDIHAS SNADFVSSAP QFPLVDDQFH CPKSPFSSNP VIEKHESNDD FLRDSEFIPK  240
EPSSSGLLEE IIYGFFPKPQ NSQPSNDMSS VASEANFGHS FDGYKRSCVD DQQTGYNYQT  300
GSVQLGNLNH SYCNAAEEMS FVNGLPMNVQ MGMESGNLIM ENLLQYPEFF NAYAAKIQNA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A3e-1760115359ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankLN6818961e-169LN681896.1 Cucumis melo genomic scaffold, anchoredscaffold00016.
GenBankLN7132641e-169LN713264.1 Cucumis melo genomic chromosome, chr_10.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011656252.10.0PREDICTED: ethylene-responsive transcription factor ESR2-like
TrEMBLA0A0A0KTJ20.0A0A0A0KTJ2_CUCSA; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF41003256
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G24590.17e-18DORNROSCHEN-like